A Practical Introduction to Working with Medical Image Data


Figure 1

For example, datasets in ITK-SNAP are illustrated in the following figures. Figure. CT-PET-VI-02 dataset


Figure 2

Figure. Description of ITK-SNAP tools in the main window using MRI-crop example datasets for plane and 3D views.
Figure. Description of ITK-SNAP tools in the main window using MRI-crop example datasets for plane and 3D views.

Figure 3

Figure. ITK-SNAP opening image file
Figure. ITK-SNAP opening image file

Figure 4

Figure. ITK-SNAP main window
Figure. ITK-SNAP main window

Figure 5

Figure. ITK-SNAP cursor inspector
Figure. ITK-SNAP cursor inspector

Figure 6

Figure. ITK-SNAP additional image
Figure. ITK-SNAP additional image

Figure 7

Figure. ITK-SNAP thumbnails, handlding two DICOM images (inhale_BH_CT and exhale_BH_CT for CT-PET-VI-02)
Figure. ITK-SNAP thumbnails, handlding two DICOM images (inhale_BH_CT and exhale_BH_CT for CT-PET-VI-02)

Figure 8

Figure. ITK-SNAP thumbnails
Figure. ITK-SNAP thumbnails

Figure 9

Figure. ITK-SNAP semi-transparent overlays
Figure. ITK-SNAP semi-transparent overlays

Figure 10

Figure. ITK-SNAP: Layer inspector with general tab
Figure. ITK-SNAP: Layer inspector with general tab

Figure 11

Figure. ITK-SNAP: Layer inspector with contrast tab
Figure. ITK-SNAP: Layer inspector with contrast tab

Figure 12

Figure. ITK-SNAP: Layer inspector with color map tab
Figure. ITK-SNAP: Layer inspector with color map tab

Figure 13

Figure. ITK-SNAP: Layer inspector with info tab
Figure. ITK-SNAP: Layer inspector with info tab

Figure 14

Figure. ITK-SNAP: Layer inspector with metadata tab
Figure. ITK-SNAP: Layer inspector with metadata tab

Figure 15

Figure. ITK-SNAP Reorient image
Figure. ITK-SNAP Reorient image

Figure 16

Figure. ITK-SNAP: Metadata for 16-bit integers vs 32-bit floats
Figure. ITK-SNAP: Metadata for 16-bit integers vs 32-bit floats

Figure 17

Figure. ITK-SNAP: Cropped image in ITK-SNAP
Figure. ITK-SNAP: Cropped image in ITK-SNAP

Figure 18

Figure. ITK-SNAP: Cropped image in ITK-SNAP
Figure. ITK-SNAP: Cropped image in ITK-SNAP

Figure 19

Figure. ITK-SNAP main window
Figure. ITK-SNAP main window

Figure 20

Figure. ITK-SNAP main window
Figure. ITK-SNAP main window

Demons Image RegistrationDemons Image Registration Algorithm with Multi-Pane Display


Figure 1

Level 1 Results
Level 1 Results

Figure 2

Level 2 Results
Level 2 Results

Figure 3

Level 3 Results
Level 3 Results